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Small molecules targeting G-quadruplex of oncogene promoter is considered as a promising anticancer therapeutics approach. Natural aloe compounds aloe emodin, and its glycoside derivative aloe emodin-8-glucoside and aloin have anticancer activity and also have potential DNA binding ability. These three compounds have promising binding ability towards quadruplex structures particularly  c-KIT  G-quadruplex. Here, this study demonstrates complete biophysical study of these compounds to  c-KIT  quadruplex structure. Aloe emodin showed highest binding stabilization with  c-KIT  which has been proved by absorbance, fluorescence, dye displacement, ITC and SPR studies. Moreover, comparative study of these compounds with HCT 116 cells line also agreed to their anti proliferative property which may be helpful to establish these aloe compounds as potential anticancer drugs. This study comprises a complete biophysical study along with their anti proliferative property and demonstrates aloe emodin as a potent  c-KIT  binding molecule.

Targeting aloe active compounds to c-KIT promoter G-quadruplex and comparative study of their anti proliferative property