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Nonlinear electrophoretic response yields a unique parameter for separation of biomolecules
Author(s) -
Joel Pel,
David Broemeling,
Laura Mai,
Hau-Ling Poon,
G. Tropini,
Robin M. Warren,
Robert A. Holt,
Andre Marziali
Publication year - 2009
Publication title -
proceedings of the national academy of sciences
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 5.011
H-Index - 771
eISSN - 1091-6490
pISSN - 0027-8424
DOI - 10.1073/pnas.0907402106
Subject(s) - biomolecule , electrophoresis , superposition principle , nucleic acid , biological system , dna , nonlinear system , extraction (chemistry) , molecule , displacement (psychology) , chemistry , gel electrophoresis of nucleic acids , chromatography , chemical physics , physics , biology , biochemistry , quantum mechanics , organic chemistry , psychotherapist , psychology
We demonstrate a unique parameter for biomolecule separation that results from the nonlinear response of long, charged polymers to electrophoretic fields and apply it to extraction and concentration of nucleic acids from samples that perform poorly under conventional methods. Our method is based on superposition of synchronous, time-varying electrophoretic fields, which can generate net drift of charged molecules even when the time-averaged molecule displacement generated by each field individually is zero. Such drift can only occur for molecules, such as DNA, whose motive response to electrophoretic fields is nonlinear. Consequently, we are able to concentrate DNA while rejecting high concentrations of contaminants. We demonstrate one application of this method by extracting DNA from challenging samples originating in the Athabasca oil sands.

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