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The ion trap mass spectrometer is a tandem-in-time instrument that has promise as an extremely sensitive device for practical tandem mass spectrometry assays. An approach for the quantitative analysis of unknown drug levels in crude extracts, using combined capillary gas chromatography and the ion trap mass spectrometer in the tandem mode, is described. One-gram plasma samples were spiked with an anti-inflammatory drug at levels of 1-100 ng, and with 50 ng of a chemical analog internal standard. Crude extracts of the plasma samples are analyzed by using scan functions that utilize combined radiofrequency (rf) and de voltages. The need for combined rf- and de-voltage sequences for analysis of such extracts is demonstrated by comparison to attempted analyses using only rf voltages. Limitations of the method are: (1) the need for accurate calibration of ionization times to obtain linear calibration lines, and (2) the lack of automatic gain control for scans using combined rf and dc voltages to control and optimize parent ion populations and to allow a simpler analysis of "unknowns. "

Quantitative analysis of crude plasma extracts by ion trap tandem mass spectrometry