The thermodynamics of writing a random polymer
Author(s) -
Christopher Jarzynski
Publication year - 2008
Publication title -
proceedings of the national academy of sciences
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 5.011
H-Index - 771
eISSN - 1091-6490
pISSN - 0027-8424
DOI - 10.1073/pnas.0805209105
Subject(s) - hydrosphere , dissolution , biogeochemistry , redox , environmental chemistry , permafrost , carbon cycle , earth science , geomicrobiology , chemistry , environmental science , chemical physics , nanotechnology , ecology , materials science , geology , microbial ecology , inorganic chemistry , biosphere , oceanography , paleontology , ecosystem , biology , bacteria , environmental biotechnology
The notion that information has physical, and in particular, thermodynamic, content can be traced to the paradox of Maxwell's demon, a sly creature who observes the microscopic motions of gas particles on both sides of a partition (1). By controlling a trap door the demon segregates fast particles from slow ones to create a temperature difference across the partition, seemingly without expending any work. Generations of physicists have scratched their heads over this apparent violation of the second law of thermodynamics (2–5). The resolution that has eventually emerged acknowledges that a real-life Maxwell's demon—say, a nanoscale machine designed for the task—collects information as it operates, and work must be expended to erase this information, otherwise the demon's memory banks fill up. The minimum work required is kBT ln 2 per bit of information, precisely what is needed to rescue the second law from the paradox. In this issue of PNAS, Andrieux and Gaspard (6) analyze the flip side of the thermodynamic cost of information erasure; namely, the cost of information acquisition. The setting of their analysis is not a demon and a gas, but rather a process essential to living organisms: copolymerization, in which a chain-like molecule grows by the addition of chemically distinct units (monomers). The most celebrated example is the replication of DNA, by which genetic information is copied at the molecular level, ultimately to pass down the generations of a family tree. Noting that copolymerization is a physical process “ruled by the statistical laws of motion and thermodynamics,” Andrieux and Gaspard (6) set out to investigate the implications of these laws, focusing on the interplay between the information that gets stored in the sequence of monomers (e.g., the pattern of nucleotides A, G, C, and T in the case of …
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