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Population genetic structure, phylogeography, and demographic history of Platycrater arguta (Hydrangeaceae) endemic to East China and South Japan, inferred from chloroplast DNA sequence variation
Author(s) -
Iu Ying-Xiong Q,
Qi Xin-Shuai,
Jin Xiao-Feng,
Tao Xiao-Yu,
Fu Cheng-Xing,
Naiki Akiyo,
Comes Hans Peter
Publication year - 2009
Publication title -
taxon
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.819
H-Index - 81
eISSN - 1996-8175
pISSN - 0040-0262
DOI - 10.1002/tax.584014
Subject(s) - biology , analysis of molecular variance , range (aeronautics) , phylogeography , chloroplast dna , population , molecular clock , vicariance , nucleotide diversity , demographic history , coalescent theory , ecology , genetic structure , genetic variation , haplotype , phylogenetic tree , demography , genetics , materials science , sociology , gene , genotype , composite material
Platycrater arguta (Hydrangeaceae) is a small deciduous shrub of the SinoJapanese floristic region, where it occurs in montane sites mostly covered with warmtemperate deciduous forest. This sole representative of its genus contains two varieties disjunctly distributed between East China (var. sinensis ) and South Japan (var. arguta ). To illuminate the biogeographic and demographic history of this rare species, we conducted a survey of chloroplast DNA (cpDNA) sequence variation ( trnDtrnE, trnHpsbA ) within and among twelve populations (four from China, eight from Japan, 129 individuals in total) representing the overall distributional range of the species. Based on a total of 19 haplotypes identified, P. arguta was found to harbor surprisingly high levels of haplotype and nucleotide diversity ( h T = 0.882; T = 0.00475), possibly associated with its long evolutionary history. Spatial analysis of molecular variance found two regional phylogroups, corresponding to var. sinensis and var. arguta , and supported by genealogical (unrooted network) analysis of haplotypes. Using a coalescentbased model of 'divergence by isolation with migration', the likely vicariant origin of these varieties was dated to the midPleistocene (ca. 0.89 mya). Very similar haplotype mismatch distributions indicate that var. sinensis and var. arguta underwent past demographic growth almost simultaneously (dated to ca. 0.43 and 0.45 mya, respectively), suggesting climateinduced expansion. However, var. sinensis likely experienced a mere demographic expansion in a narrowly circumscribed mountain range, while var. arguta underwent a spatial northward expansion that might have consisted of a series of bottlenecks, leading to genetically impoverished populations that most likely derived from initial population(s) in southern Kyushu. Our results endorse the recognition of two 'evolutionarily significant units' within P. arguta , corresponding to var. sinensis from East China and var. arguta from South Japan.

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