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Computational insights into the photochemical step of the reaction catalyzed by protochlorophylide oxidoreductase
Author(s) -
Silva Pedro J.,
Ramos Maria João
Publication year - 2011
Publication title -
international journal of quantum chemistry
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 0.484
H-Index - 105
eISSN - 1097-461X
pISSN - 0020-7608
DOI - 10.1002/qua.22671
Subject(s) - protochlorophyllide , chemistry , oxidoreductase , excited state , photochemistry , potential energy surface , porphyrin , density functional theory , conjugated system , catalysis , ground state , hydride , computational chemistry , molecule , hydrogen , enzyme , atomic physics , physics , organic chemistry , polymer
Abstract The light‐dependent enzyme protochlorophyllide oxidoreductase (EC:1.3.1.33) catalyzes the conversion of protochlorophyllide (PChlide) into chlorophyllide during chlorophyll synthesis. The reaction has been proposed to proceed through light‐induced weakening of the C17–C18 double bond in PChlide, which then facilitates hydride transfer from a NADPH cosubstrate molecule. We have performed DFT and TDDFT computations on the reaction mechanism of this interesting enzyme. The results show that whereas in the ground state the reaction is strongly endergonic and has a very high activation free energy (38 kcal/mol), the first four excited states (corresponding to excitations within the conjugated porphyrin π‐system) afford much lower activation free energies (<25 kcal/mol) and spontaneous (or only slightly endergonic) reaction paths. The sharp shape of the potential energy surface along the reaction coordinate in these excited states allows hydrogen tunneling to occur efficiently on the first few excited state surface, lowering the barrier to values closer to experiment, in agreement with recent suggestions. © 2010 Wiley Periodicals, Inc. Int J Quantum Chem, 2010