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This study aimed to verify if the genetic divergence between papaya lines, obtained by means of molecular markers, is correlated with heterosis in the hybrids for characteristics related to production, fruit quality and disease resistance. Eight parents and 56 hybrids obtained from diallel crosses were evaluated in randomized blocks, with four replicates. The number of commercial fruits (NCF), the average fruit weight (AFW), the productivity (PROD), the fruit firmness (FIRM) and the total soluble solids (TSS) were evaluated, as well as the severity of black spot on leaves (BSS) and fruits (BSSFr), phoma spot (PSS) and powdery mildew on leaves (PMS). Correlations were estimated between genetic divergence, obtained based on Vivas, M.; Cardoso, D.L.; Ramos, H.C.C.; Santos, P.H.D.; Silveira, S.F.; Moraes, R.; Pereira, M.G. Genetic diversity between papaya lines and their correlation with heterosis in hybrids for disease resistance and morpho-agronomic traits. Summa Phytopathologica, v.44, n.1, p.110-115, 2018. SSR, and heterosis, estimated for each characteristic in four possibilities of crossings within the diallel: i) all crossings; ii) between parents of the ‘Solo’ group; iii) between parents of the ‘Formosa’ group; and iv) between parents of ‘Solo’ with ‘Formosa’ group and ‘Formosa’ with ‘Solo’ group. Results indicate the possibility of exploring heterosis both in crossings between groups and in crossings within groups. The low magnitude of the estimates of correlation between heterosis and morphological characteristics of the hybrids with genetic distance obtained by SSR in the parents indicates that the behavior of hybrids cannot be inferred based on the genetic divergence