English (United Kingdom)

https://curated-unify.zendy.io/wp-json/zendy-region/v1/featured_content/oa?rat=en

https://curated-unify.zendy.io/wp-json/zendy-region/v1/highlighted_journal/

Global: Zendy Plus annual

Presents the access of premium content as premium feature

Premium Content

Presents the keyphrase highlighting as premium feature

Keyphrase Highlighting

Presents the summarisation as premium feature

Summarisation

Insights

Presents the pdf analysis as premium feature

PDF Analysis

Presents the zaia usage as premium feature

ZAIA

Global: Zendy Tools annual

Global: Zendy Free Plan

Global: Zendy Tools monthly

Global: Zendy Plus monthly

MethylExtract main script (MethylExtract_version.pl)The main script of MethylExtract performs methylation profiling and SNV (Single Nucleotide Variant) calling from previously aligned bisulfite-treated reads. The script includes multiple quality-control related features. to.Estimation of the bisulfite conversion rate (MethylExtractBSCR_version.pl) The script calculates the bisulfite conversion rate from an unmethylated genome. In the case of plants, the script can be run with the reads aligned to the chloroplast genome, while in other organisms an unmethylated genome (as the phage lambda) must be added to the experimental setup.Statistical assessment of the bisulfite conversion rate (MethylExtractBSPvalue_version.pl)The script calculates the error probability (p-value) for each position using the binomial distribution, given an error interval for the methylation levels. In addition, the Benjamini-Hochberg step-up procedure has been implemented to control the false discovery rate. Note that the bisulfite conversion rate must be known to run this script

MethylExtract: High-Quality methylation maps and SNV calling from whole genome bisulfite sequencing data.