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Systematic mappings of protein interactome networks have provided invaluable functional information for numerous model organisms. Here we develop P CR-mediated L inkage of barcoded A dapters T o nucleic acid E lements for seq uencing (PLATE-seq) that serves as a general tool to rapidly sequence thousands of DNA elements. We validate its utility by generating the ORFeome for Oryza sativa covering 2,300 genes and constructing a high-quality protein-protein interactome map consisting of 322 interactions between 289 proteins, expanding the known interactions in rice by roughly 50%. Our work paves the way for high-throughput profiling of protein-protein interactions in a wide range of organisms.

A massively parallel barcoded sequencing pipeline enables generation of the first ORFeome and interactome map for rice